IntroductionWorking with containersWhy Apptainer/Singularity?Apptainer vs SingularityDocumentation


Figure 1

Apptainer/Singularity

Containers and ImagesThe Apptainer Command Line InterfaceDownloading ImagesRunning Containers


Coffee break!


Building Containers


Figure 1

Apptainer/Singularity usage workflow
‘Apptainer/Singularity usage workflow’ via Kurtzer GM, Sochat V, Bauer MW (2017) Singularity: Scientific containers for mobility of compute. PLoS ONE 12(5): e0177459. https://doi.org/10.1371/journal.pone.0177459

Containers from definition files


Coffee break!


Sharing files between host and container


Apptainer/Singularity instances


Bonus Episode: Building and deploying an Apptainer container to Github Packages